Data Processing 

 

 

A number of automatic evaluation processes will be occurring:

  • Albert's automation, which will automatically perform the following, as long as the data collection is not aborted part way through data collection:
    • Command-line User Input commands for quick and automatic data processing when using SER-CAT computer systems
    • The automated data processing files and results will be under the "zz*..." sub-directories
    • A summary of automated data processing results can be found under Processing -> Auto Process Log on "sergui"
  • Use a different computer for processing your data; doing this will help avoid impacting your on-going data collections
  • The most recent and reliable direct beam information is obtained by typing:
    • ssbeamxy aps22idd (or: ssbeamxy aps22ide); this will return a list of the following:
      • Definitions of various different detectors
      • Directbeam coordinates, as required for various processing packages
      • Command-line User Input commands for quick and automatic data processing when using SER-CAT computer systems
      • Also: the relevant direct beam information for your data collections (along with a great deal of other useful information) will be automatically be saved for you in the following location(s):
        • /data/IDD_name_institution.raw/beamcenter_22IDD.dat (or analogous gzipped file)
        • /data/IDE_name_institution.raw/beamcenter_22IDE.dat (or analogous gzipped file)
  • A SER-CAT Data Processing Guide is available, and is filled with valuable information.
  • Remember that SER-CAT is presently using the following two types of detectors:
    • 22-ID-D: Eiger X16M (Dectris)
    • 22-ID-E: MX300-HS (Rayonix)
  • Obtaining directbeam coordinates, required for various processing packages, is best found by checking the information automatically stored in the file located at (depending upon beamline):
    • /data/IDD_name_institution.raw/beamcenter_22IDD.dat
    • /data/IDE_name_institution.raw/beamcenter_22IDE.dat
  • SGXPRO:
    • Download sgxpro.tar link to desired location; from there type (omit quotation marks): "tar xvf sgxpro.tar; ./sgxpro_install"
  • HKL2000 documentation is available from the authors:

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